Cross Dataset Verification of Cell Type Annotation using a Transcriptomic Biomedical Foundation Model: Inflammatory Bowel Disease Use CaseAkihiro KosugiVibha Anandet al.2024ISMB 2024
Contextualizing Single-Cell Analyses: An AI Pipeline for Evidence Search from Literature and Gene DatabasesJoao Bettencourt-SilvaNatasha Mulliganet al.2024ISMB 2024
Identifying Putative Gene Markers: A Biomedical Foundation Model-based Approach for Cell Type AnnotationUri KartounAkira Kosekiet al.2024ISMB 2024
Effective In-Silico Gene Perturbation by Machine Learning Model Interpretation for ImmunotherapiesTanwi BiswasAkira Kosekiet al.2024ISMB 2024
Effect of dataset partitioning strategies for evaluating out-of-distribution generalisation for predictive models in biochemistryRaúl Fernández DíazLam Thanh Hoanget al.2024MoML 2024
Causes in Clinical Trials Failure of Inflammatory Bowel Disease (IBD): An Artificial Intelligence-assisted reviewTesfaye YadeteKingsley Njokuet al.2024DDW 2024
Large Language Models and Biomedical Annotators to Extract Information from Scientific Literature in Inflammatory Bowel DiseaseEugenia KarulinaJoao Bettencourt-Silvaet al.2024AMIA Informatics Symposium 2024
Spatial Inequities of Heat Vulnerability: Preliminary Findings from African Urban CentersCraig MahlasiSibusisiwe Makhanyaet al.2023AGU Fall 2023