Jie Shi

Publications

• ML-Guided Engineering to Enhance Cell-Organelle Capacity for Multi-Enzyme Pathway Compartmentalization

  • • Jie Shi
    • Jordan Baker
    • et al.
  • 2025
  • ACS Spring 2025

• Integrating Molecular Dynamics Simulations and Machine Learning to Uncover Important Determinants of protein-protein Interactions

  • • Tiffany Callahan
    • Kevin Cheng
    • et al.
  • 2025
  • ACS Spring 2025

• A MACHINE LEARNING APPROACH FOR IDENTIFYING DETERMINANTS OF WNT PROTEIN-PROTEIN INTERACTIONS

  • • Tiffany Callahan
    • Kevin Cheng
    • et al.
  • 2025
  • BPS 2025

• Atomistic simulations and machine learning approaches to investigate bromoform interactions with cell membranes: Implications for seaweed-based methane emission reduction

  • • Jie Shi
    • Kevin Cheng
    • et al.
  • 2024
  • ACS Fall 2024

• Optimizing CAR T cell design using quantum convolutional neural networks

  • • Sara Capponi
    • Kahn Rhrissorrakrai
    • et al.
  • 2024
  • ISMB 2024

• INVESTIGATING BROMOFORM-MEMBRANE INTERACTIONS TO MITIGATE CLIMATE CHANGE USING ATOMISTIC SIMULATIONS

  • • Sara Capponi
    • Jie Shi
  • 2023
  • BPS 2023